Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6451814 chr5:45735083 C/T LOC647121 chr1:121260910-121313686:+ 0.39 8.43 3.96E-16 Box Plot
THCA rs6451827 chr5:45879598 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.78 4.52E-14 Box Plot
THCA rs6451829 chr5:45893362 C/T LOC647121 chr1:121260910-121313686:+ 0.37 7.87 2.42E-14 Box Plot
THCA rs6451830 chr5:45893456 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.79 4.28E-14 Box Plot
THCA rs6451831 chr5:45917420 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.76 5.27E-14 Box Plot
THCA rs6451834 chr5:45927310 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.8 3.92E-14 Box Plot
THCA rs6451835 chr5:45928837 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.87 2.31E-14 Box Plot
THCA rs6451836 chr5:45928918 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.87 2.31E-14 Box Plot
THCA rs6451838 chr5:45935162 C/T LOC647121 chr1:121260910-121313686:+ 0.37 7.99 1.04E-14 Box Plot
THCA rs6451840 chr5:45935686 A/C LOC647121 chr1:121260910-121313686:+ 0.37 7.93 1.58E-14 Box Plot
THCA rs6451842 chr5:45936533 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.93 1.58E-14 Box Plot
THCA rs6451843 chr5:45946785 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.11 4.18E-15 Box Plot
THCA rs6451851 chr5:46135280 T/A LOC647121 chr1:121260910-121313686:+ 0.37 8.09 4.91E-15 Box Plot
THCA rs6451854 chr5:46165780 C/G LOC647121 chr1:121260910-121313686:+ 0.37 8.09 4.9E-15 Box Plot
THCA rs6456729 chr6:26484330 A/C ZNF322B chr9:99957633-99961910:- 0.51 7.17 2.83E-12 Box Plot